TRANSFAC-Logo

TRANSFAC FACTOR TABLE, Release 2017.2 - public - 2017-06-30, (C) QIAGEN


AC T09230 XX ID T09230 XX DT 16.08.2006 (created); din. DT 05.10.2015 (updated); sla. CO Copyright (C), QIAGEN. XX FA Prep-1isoform1 XX SY Pbx regulating protein 1; PBX/Knox1-related homeobox; Prep1; Prep1-isoform1. XX OS human, Homo sapiens OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia; eutheria; primates XX GE G002132 PKNOX1; HGNC: PKNOX1. XX CL C0006; homeo; 3.1.4.5.1.1. XX SZ 436 AA; 47.5 kDa (cDNA) (calc.). XX SQ MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYR SQ HPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVK SQ AIQVLRIHLLELEKVNELCKDFCSRYIACLKTEMNSETLLSGEPGSPYSPVQSQQIQSAI SQ TGTISPQGIVVPASALQQGNVAMATVAGGTVYQPVTVVTPQGQVVTQTLSPGTIRIQNSQ SQ LQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTN SQ LTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPS SQ ELTMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEEDAGALA SQ PAHISGLVLANSDSLQ XX SC translated from EMBL #Y13613 XX FT 8 309 PF00478; IMP dehydrogenase / GMP reductase domain. FT 50 83 HR1 domain [7]. FT 108 153 HR2 domain [7]. FT 257 320 PS50071; HOMEOBOX_2. FT 259 324 SM00389; HOX_1. FT 260 319 PF00046; Homeobox domain. FT 268 280 helix 1 [7]. FT 288 298 helix 2 [7]. FT 303 318 helix 3 [7]. XX IN T00682 Pax-6; zebra fish, Brachydanio rerio. XX MX M07304 V$PBX_Q5. MX M01459 V$PREP1_01. MX M07464 V$PREP1_Q3. XX BS R09696. BS R09700. BS R08497. BS R09699. BS R12755. BS R20301. XX DR TRANSPATH: MO000085074. DR EMBL: AP001748; DR EMBL: U68727; DR EMBL: Y13613; DR UniProtKB: P55347-1; XX RN [1]; RE0014544. RX PUBMED: 9336443. RA Burglin T. R. RT Analysis of TALE superclass homeobox genes (MEIS, PBC, KNOX, Iroquois, TGIF) reveals a novel domain conserved between plants and animals RL Nucleic Acids Res. 25:4173-4180 (1997). RN [2]; RE0015485. RX PUBMED: 9143494. RA Chen H., Rossier C., Nakamura Y., Lynn A., Chakravarti A., Antonarakis S. E. RT Cloning of a novel homeobox-containing gene, PKNOX1, and mapping to human chromosome 21q22.3 RL Genomics 41:193-200 (1997). RN [3]; RE0015486. RX PUBMED: 9479508. RA Berthelsen J., Viggiano L., Schulz H., Ferretti E., Consalez G. G., Rocchi M., Blasi F. RT PKNOX1, a gene encoding PREP1, a new regulator of Pbx activity, maps on human chromosome 21q22.3 and murine chromosome 17B/C RL Genomics 47:323-324 (1998). RN [4]; RE0015488. RX PUBMED: 9482739. RA Berthelsen J., Zappavigna V., Mavilio F., Blasi F. RT Prep1, a novel functional partner of Pbx proteins RL EMBO J. 17:1423-1433 (1998). RN [5]; RE0015495. RX PUBMED: 9405651. RA Knoepfler P. S., Calvo K. R., Chen H., Antonarakis S. E., Kamps M. P. RT Meis1 and pKnox1 bind DNA cooperatively with Pbx1 utilizing an interaction surface disrupted in oncoprotein E2a-Pbx1 RL Proc. Natl. Acad. Sci. USA 94:14553-14558 (1997). RN [6]; RE0015500. RX PUBMED: 9482740. RA Berthelsen J., Zappavigna V., Ferretti E., Mavilio F., Blasi F. RT The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity RL EMBO J. 17:1434-1445 (1998). RN [7]; RE0017883. RX PUBMED: 11972344. RA Fognani C., Kilstrup-Nielsen C., Berthelsen J., Ferretti E., Zappavigna V., Blasi F. RT Characterization of PREP2, a paralog of PREP1, which defines a novel sub-family of the MEINOX TALE homeodomain transcription factors RL Nucleic Acids Res. 30:2043-2051 (2002). RN [8]; RE0047951. RX PUBMED: 15138251. RA Rave-Harel N., Givens M. L., Nelson S. B., Duong H. A., Coss D., Clark M. E., Hall S. B., Kamps M. P., Mellon P. L. RT TALE homeodomain proteins regulate gonadotropin-releasing hormone gene expression independently and via interactions with Oct-1. RL J. Biol. Chem. 279:30287-30297 (2004). RN [9]; RE0047970. RX PUBMED: 11069920. RA Mikkola I., Bruun J. A., Holm T., Johansen T. RT Superactivation of Pax6-mediated transactivation from paired domain-binding sites by dna-independent recruitment of different homeodomain proteins. RL J. Biol. Chem. 276:4109-4118 (2001). XX //