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TRANSFAC FACTOR TABLE, Release 2017.2 - public - 2017-06-30, (C) QIAGEN


AC T01720 XX ID T01720 XX DT 08.03.1996 (created); ewi. DT 03.03.2014 (updated); jtr. CO Copyright (C), QIAGEN. XX FA HOXB1 XX SY Hox-2.9. XX OS mouse, Mus musculus OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia; eutheria; rodentia; myomorpha; muridae; murinae XX GE G002142 Hoxb1. XX HO Lab (Drosophila) T02064. XX CL C0006; homeo; 3.1.1.1.2. XX SF CD spectroscopy revealed an alpha-helix content of about 71% [1]; SF relatively high affinity to a homeo domain consensus sequence: KD = 2.6 nM [1]; SF interaction with Pbx-1 T03451 T02088 [9] [10]; SF cooperative binding with Exd T01482 [8]; XX CP specifically expressed in rhombomere r4 of the developing hindbrain, apparently delimited by Krox-20 T00454 expression in r3 and r5 [2]. XX FF HOXB1 expression and rhombomere identity remain unaltered after transplantation to another region of the hindbrain [7]; FF highly sensitive towards retinoic acid (RA)-induction [6]; FF HOXB1 in conjunction with Pbx-1 T03451 T02088 can activate rhombomere-specific expression of Eph (ephrin) receptors [9]; FF HOXB1 is able to activate its own expression (autoregulation) [8]; XX IN T03451 Pbx1a; mouse, Mus musculus. IN T02088 Pbx1b; mouse, Mus musculus. XX BS R32602. XX DR TRANSPATH: MO000025894. DR UniProtKB: P17919; XX RN [1]; RE0003885. RX PUBMED: 7911971. RA Pellerin I., Schnabel C., Catron K. M., Abate C. RT Hox proteins have different affinities for a consensus DNA site that correlate with the positions of their genes on the hox cluster RL Mol. Cell. Biol. 14:4532-4545 (1994). RN [2]; RE0003916. RX PUBMED: 2571936. RA Wilkinson D. G., Bhatt S., Cook M., Boncinelli E., Krumlauf R. RT Segmental expression of Hox-2 homoeobox-containing genes in the developing mouse hindbrain RL Nature 341:405-409 (1989). RN [3]; RE0003917. RX PUBMED: 1983472. RA Frohman M. A., Boyle M., Martin G. R. RT Isolation of the mouse Hox-2.9 gene; analysis of embryonic expression suggests that positional information along the anterior-posterior axis is specified by mesoderm RL Development 110:589-607 (1990). RN [4]; RE0003918. RX PUBMED: 1972280. RA Rubock M. J., Larin Z., Cook M., Papalopulu N., Krumlauf R., Lehrach H. RT A yeast artificial chromosome containing the mouse homeobox cluster Hox-2 RL Proc. Natl. Acad. Sci. USA 87:4751-4755 (1990). RN [5]; RE0003919. RX PUBMED: 1673098. RA Murphy P., Hill R. E. RT Expression of the mouse labial-like homeobox-containing genes, Hox 2.9 and Hox 1.6, during segmentation of the hindbrain RL Development 111:67-74 (1991). RN [6]; RE0003922. RX PUBMED: 1682879. RA Papalopulu N., Lovell-Badge R., Krumlauf R. RT The expression of murine Hox-2 genes is dependent on the differentiation pathway and displays a collinear sensitivity to retinoic acid in F9 cells and Xenopus embryos RL Nucleic Acids Res. 19:5497-5506 (1991). RN [7]; RE0003923. RX PUBMED: 1545869. RA Guthrie S., Muchamore I., Kuroiwa A., Marshall H., Krumlauf R., Lumsden A. RT Neuroectodermal autonomy of Hox-2.9 expression revealed by rhombomere transpositions RL Nature 356:157-159 (1992). RN [8]; RE0010309. RX PUBMED: 7600572. RA Poepperl H., Bienz M., Studer M., Chan S.-K., Aparicio S., Brenner S., Mann R. S., Krumlauf R. RT Segmental Expression of Hoxb-1 Is Controlled by a Highly Conserved Autoregulatory Loop Dependent upon exd/pbx RL Cell 81:1031-1042 (1995). RN [9]; RE0014613. RX PUBMED: 9733765. RA Chen J., Ruley H. E. RT An enhancer element in the EphA2 (Eck) gene sufficient for rhombomere-specific expression is activated by HOXA1 and HOXB1 homeobox proteins RL J. Biol. Chem. 273:24670-24675 (1998). RN [10]; RE0014614. RX PUBMED: 8763497. RA Mann R. S., Chan S. K. RT Extra specificity from extradenticle: the partnership between HOX and PBX/EXD homeodomain proteins RL Trends Genet. 12:258-262 (1996). RN [11]; RE0047786. RX PUBMED: 12487626. RA Subramaniam N., Campion J., Rafter I., Okret S. RT Cross-talk between glucocorticoid and retinoic acid signals involving glucocorticoid receptor interaction with the homoeodomain protein Pbx1. RL Biochem. J. 370:1087-1095 (2003). XX //